1 | function out = impaint(fig,varargin) |
---|
2 | % out = impaint(fig) |
---|
3 | % |
---|
4 | % Create an overlay on the current active image and allow for painting the |
---|
5 | % overlay. |
---|
6 | % Possible calls: |
---|
7 | % impaint(h,'on'); start the overlay |
---|
8 | % impaint(h,'off'); remove the whole overlay |
---|
9 | % impaint(h,classnr,[r g b]); define a new class with colour [r g b] |
---|
10 | % out = impaint(h,'get'); get the label image out |
---|
11 | % |
---|
12 | % You can leave out h, then the current active figure is used. |
---|
13 | % |
---|
14 | % There are also some interactive changes that you can make: |
---|
15 | % t toggles impaint on and off |
---|
16 | % Nc selects another class label (prefix this command with the |
---|
17 | % class number N) |
---|
18 | % Nb sets the brush size to N (prefix this command with the brush |
---|
19 | % size N) |
---|
20 | % s save the current labels in Matlab variable 'lab' |
---|
21 | % |
---|
22 | % See also im_update |
---|
23 | |
---|
24 | |
---|
25 | % When nothing is defined: |
---|
26 | if nargin<2 |
---|
27 | varargin = {'on'}; |
---|
28 | end |
---|
29 | % Special case, because an integer can be interpreted as a handle, we |
---|
30 | % assume that when a single input is given, it is actually a label |
---|
31 | if nargin==1 |
---|
32 | if isnumeric(fig) |
---|
33 | varargin{1} = fig; |
---|
34 | fig = gcf; |
---|
35 | end |
---|
36 | end |
---|
37 | if nargin<1 |
---|
38 | fig = gcf; |
---|
39 | end |
---|
40 | % make sure that the first input is the figure handle: |
---|
41 | if ~ishandle(fig) |
---|
42 | varargin = {fig varargin{:}}; |
---|
43 | fig = gcf; |
---|
44 | end |
---|
45 | |
---|
46 | % Check if we want to get/set the active class, or (re)define a class: |
---|
47 | if isnumeric(varargin{1}) |
---|
48 | allUD = get(fig,'userdata'); |
---|
49 | if ~isfield(allUD,'impaint') |
---|
50 | error('This image does not have an overlay defined.'); |
---|
51 | end |
---|
52 | UD=allUD.impaint; % our part of UD |
---|
53 | if length(varargin)==1 % we want to set/get the active class |
---|
54 | if varargin{1}>size(UD.msk_fg,1) |
---|
55 | error('This class is not defined in the overlay.'); |
---|
56 | else |
---|
57 | UD.currlab = varargin{1}; |
---|
58 | end |
---|
59 | % and (maybe more important) get the labels to the output |
---|
60 | if nargout>0 |
---|
61 | out = UD.labels; |
---|
62 | end |
---|
63 | else % we want to set the colours |
---|
64 | % We can process a whole list of colours... |
---|
65 | for i=1:2:(length(varargin)-1) |
---|
66 | [nr,clr] = checkimpaintcolor(varargin{i},varargin{i+1}); |
---|
67 | UD.msk_fg(nr,:) = clr; |
---|
68 | % Definition of the active label |
---|
69 | UD.currlab = nr; |
---|
70 | end |
---|
71 | end |
---|
72 | % store everthing in the figure: |
---|
73 | set(fig,'UserData',[]); |
---|
74 | allUD.impaint=UD; |
---|
75 | set(fig,'UserData',allUD); |
---|
76 | return; |
---|
77 | end |
---|
78 | |
---|
79 | |
---|
80 | % Now check all the 'string' possibilities: |
---|
81 | switch lower(varargin{1}) |
---|
82 | case 'on' |
---|
83 | |
---|
84 | % Set up variables: |
---|
85 | allUD=get(fig,'UserData'); % existing user data |
---|
86 | UD = []; % Here I store the UserData |
---|
87 | |
---|
88 | % Put the image on screen |
---|
89 | UD.im_ax = findobj(get(fig,'children'),'type','axes'); |
---|
90 | UD.im_im = findobj(get(UD.im_ax,'children'),'type','image'); |
---|
91 | % get the size of the image |
---|
92 | sz = size(get(UD.im_im,'cdata')); |
---|
93 | |
---|
94 | %set(fig,'busyaction','cancel','DoubleBuffer','on'); |
---|
95 | |
---|
96 | % Label storage: |
---|
97 | UD.labels = zeros(sz); % background has label=0 |
---|
98 | UD.labsize=size(UD.labels); |
---|
99 | |
---|
100 | % Mask image |
---|
101 | if length(sz)==2 |
---|
102 | mskim = zeros([sz 3]); |
---|
103 | elseif length(sz)==3 |
---|
104 | mskim = zeros(sz); |
---|
105 | else |
---|
106 | error('I cannot make a mask image for this image data.'); |
---|
107 | end |
---|
108 | %mskim(1:50, 1:140, 1) = 1; % just to show something... |
---|
109 | % Definitions of the fore- and background colour |
---|
110 | if length(varargin)==3 |
---|
111 | [nr,clr] = checkimpaintcolor(varargin{2},varargin{3}); |
---|
112 | UD.msk_fg(nr,:) = clr; |
---|
113 | % Definition of the active label |
---|
114 | UD.currlab = nr; |
---|
115 | else |
---|
116 | UD.msk_fg = [1 0 0; 0 1 0; 0 0 1]; % standard: the first class is red. |
---|
117 | % Definition of the active label |
---|
118 | UD.currlab = 1; |
---|
119 | end |
---|
120 | UD.msk_bg = [0 0 0]; |
---|
121 | % Definition of the brush-size |
---|
122 | UD.brushsz = 4; |
---|
123 | % define character command buffer: |
---|
124 | UD.charbuffer=''; |
---|
125 | UD.state='on'; % impaint is toggled on |
---|
126 | |
---|
127 | % make a second axis for the overlay: |
---|
128 | UD.pos = get(UD.im_ax,'position'); |
---|
129 | UD.msk_ax = axes('position', UD.pos); |
---|
130 | set(fig,'currentaxes',UD.msk_ax); |
---|
131 | UD.msk_im = imagesc(mskim); |
---|
132 | set(UD.msk_ax,'visible','off'); |
---|
133 | msk2 = findobj(get(UD.msk_ax,'children'),'type','image'); |
---|
134 | set(msk2,'alphadata',0.5); |
---|
135 | |
---|
136 | % set the window title: |
---|
137 | set(fig,'Name',sprintf('imprint on, brush: %d, class: %d',UD.brushsz,UD.currlab)); |
---|
138 | |
---|
139 | % to speedup coordinate transformations later: |
---|
140 | UD.sz = sz; |
---|
141 | UD.W = sz(2)./UD.pos(3); |
---|
142 | UD.H = sz(1)./UD.pos(4); |
---|
143 | UD.pos(3) = UD.pos(3)+UD.pos(1); |
---|
144 | UD.pos(4) = UD.pos(4)+UD.pos(2); |
---|
145 | |
---|
146 | % now we have to define a callback |
---|
147 | oldh.btndown=get(fig,'WindowButtonDownFcn'); |
---|
148 | set(fig,'WindowButtonDownFcn','im_update(''fill'')'); |
---|
149 | oldh.btnup=get(fig,'WindowButtonUpFcn'); |
---|
150 | set(fig,'WindowButtonUpFcn','im_update(''stopfill'')'); |
---|
151 | oldh.keypress=get(fig,'KeyPressFcn'); |
---|
152 | set(fig,'KeyPressFcn','im_update(''keypress'')'); |
---|
153 | |
---|
154 | % preserve previously set handlers |
---|
155 | UD.oldhandlers=oldh; |
---|
156 | |
---|
157 | % store everthing in the figure: |
---|
158 | set(fig,'UserData',[]); |
---|
159 | allUD.impaint=UD; % set our substructure in UD |
---|
160 | set(fig,'UserData',allUD); |
---|
161 | |
---|
162 | out=fig; |
---|
163 | return |
---|
164 | |
---|
165 | case 'get' |
---|
166 | allUD = get(fig,'userdata'); |
---|
167 | if ~isfield(allUD,'impaint') |
---|
168 | error('This image does not have an overlay defined.'); |
---|
169 | end |
---|
170 | out = allUD.impaint.labels; |
---|
171 | |
---|
172 | return |
---|
173 | |
---|
174 | case 'off' |
---|
175 | % Remove all the traces from the image: |
---|
176 | allUD = get(fig,'userdata'); |
---|
177 | if ~isfield(allUD,'impaint') |
---|
178 | error('This image does not have an overlay defined.'); |
---|
179 | end |
---|
180 | UD=allUD.impaint; |
---|
181 | delete(UD.msk_ax); |
---|
182 | |
---|
183 | % restore old handlers |
---|
184 | set(fig,'WindowButtonDownFcn',UD.oldhandlers.btndown); |
---|
185 | set(fig,'WindowButtonUpFcn',UD.oldhandlers.btnup); |
---|
186 | set(fig,'KeyPressFcn',UD.oldhandlers.keypress); |
---|
187 | |
---|
188 | rmfield(allUD,'impaint'); |
---|
189 | set(fig,'userdata',allUD); |
---|
190 | |
---|
191 | return |
---|
192 | |
---|
193 | end |
---|
194 | |
---|
195 | return |
---|
196 | |
---|
197 | function [nr,clr] = checkimpaintcolor(nr,clr) |
---|
198 | if ~isnumeric(nr) |
---|
199 | error('The class number should be a scalar.'); |
---|
200 | end |
---|
201 | if (length(nr)~=1) |
---|
202 | error('The class number should be a scalar.'); |
---|
203 | end |
---|
204 | if ~isnumeric(clr) |
---|
205 | error('The color definition should be 1x3 matrix.'); |
---|
206 | end |
---|
207 | if (length(clr)~=3) |
---|
208 | error('The color definition should be 1x3 matrix.'); |
---|
209 | end |
---|
210 | if any(clr<0) |
---|
211 | error('Colour values should be larger than 0.'); |
---|
212 | end |
---|
213 | if any(clr>1) |
---|
214 | error('Colour values should be smaller than 1.'); |
---|
215 | end |
---|
216 | % make it a nice row vector: |
---|
217 | clr = clr(:)'; |
---|
218 | return |
---|