source: prdatasets/ecoli.m @ 119

Last change on this file since 119 was 81, checked in by bduin, 11 years ago
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1%ECOLI 336 objects with 7 features in 8 classes
2%
3%      X = ECOLI
4%
5% Predict the localization site of protein in a cell, by Kenta Nakai
6% Institue of Molecular and Cellular Biology Osaka, University
7% This is the 'Ecoli'  dataset of the UCI Machine Learning Repository,
8% //www.ics.uci.edu/~mlearn/MLRepository.html
9function x = ecoli
10
11prdatasets(mfilename,1,'http://prtools.org/prdatasets/ecoli.dat');
12user.desc='The Ecoli database from UCI. Goal is to Predict the localization site of protein in a cell, by Kenta Nakai Institue of Molecular and Cellular Biology Osaka, University.';
13user.link = 'ftp://ftp.ics.uci.edu/pub/machine-learning-databases/ecoli/';
14cl = {'cytoplasm' 'inner membrane without signal sequence' ...
15'periplasm' 'inner membrane, uncleavable signal sequence' ...
16'outer membrane' 'outer membrane lipoprotein' ...
17'inner membrane lipoprotein' 'inner membrane, cleavable signal sequence'};
18fl = {'mcg' 'gvh' 'lip' 'chg' 'aac' 'alm1' 'alm2'};
19
20a = load('ecoli.dat');
21x = pr_dataset(a(:,1:(end-1)),cl(a(:,end)));
22x = setfeatlab(x,fl);
23x = setname(x,'Ecoli');
24x = setuser(x,user);
25
26return
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