Last change
on this file since 68 was
40,
checked in by dtax, 12 years ago
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HEp 2 cell classification, ICPR 2012 competition
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File size:
1.3 KB
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Rev | Line | |
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[40] | 1 | % generate a mil dataset from cells |
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| 2 | clear all;load cells_gabor; |
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| 3 | |
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| 4 | delta = 5; % how fine to sample the image |
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| 5 | |
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| 6 | N = size(x,1); |
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| 7 | bags = cell(N,1); |
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| 8 | lab = []; |
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| 9 | imlab = []; |
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| 10 | for i=1:N |
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| 11 | i |
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| 12 | % store in: |
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| 13 | thisbag = []; |
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| 14 | % get gabor features |
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| 15 | gdat = x{i,1}; |
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| 16 | msk = x{i,2}; |
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| 17 | sz = size(gdat); |
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| 18 | for i1=1:delta:sz(1) |
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| 19 | for i2=1:delta:sz(2) |
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| 20 | if (msk(i1,i2)>0) |
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| 21 | thisbag = [thisbag; squeeze(gdat(i1,i2,:))']; |
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| 22 | end |
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| 23 | end |
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| 24 | end |
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| 25 | bags{i} = thisbag; |
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| 26 | %lab{i} = x{i,4}; % label of bag |
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| 27 | lab = [lab; x{i,4}]; |
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| 28 | imlab = [imlab; repmat(x{i,3},size(thisbag,1),1)]; % original image label |
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| 29 | end |
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| 30 | a = genmil(bags,strvcat(lab)); |
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| 31 | a = setident(a,imlab,'image'); |
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| 32 | |
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| 33 | M = size(z,1); |
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| 34 | bags = cell(M,1); |
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| 35 | lab = []; |
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| 36 | imlab = []; |
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| 37 | for i=1:M |
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| 38 | i |
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| 39 | % store in: |
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| 40 | thisbag = []; |
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| 41 | % get gabor features |
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| 42 | gdat = z{i,1}; |
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| 43 | msk = z{i,2}; |
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| 44 | sz = size(gdat); |
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| 45 | for i1=1:delta:sz(1) |
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| 46 | for i2=1:delta:sz(2) |
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| 47 | if (msk(i1,i2)>0) |
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| 48 | thisbag = [thisbag; squeeze(gdat(i1,i2,:))']; |
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| 49 | end |
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| 50 | end |
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| 51 | end |
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| 52 | bags{i} = thisbag; |
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| 53 | %lab{i} = z{i,4}; % label of bag |
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| 54 | lab = [lab; z{i,4}]; |
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| 55 | imlab = [imlab; repmat(z{i,3},size(thisbag,1),1)]; % original image label |
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| 56 | end |
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| 57 | b = genmil(bags,strvcat(lab)); |
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| 58 | b = setident(b,imlab,'image'); |
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| 59 | |
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| 60 | save cellsmil_delta5 a b; |
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| 61 | |
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