Rev | Line | |
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[10] | 1 | % Read Bunke's data to PRTOOLS |
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| 2 | |
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| 3 | function D = prtbunke(fname) |
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| 4 | |
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| 5 | fid = fopen(fname,'r'); |
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| 6 | if fid == -1, |
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| 7 | error(['File not found: ' fname]) |
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| 8 | end |
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| 9 | |
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| 10 | ok = 0; |
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| 11 | info = []; |
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| 12 | lab = []; |
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| 13 | |
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| 14 | while ~ok, |
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| 15 | str = fgetl(fid); |
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| 16 | switch str |
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| 17 | case '.CHARACTERBAND TYPE' |
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| 18 | info.datatype = fgets(fid); |
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| 19 | |
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| 20 | case '.COST FUNCTION' |
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| 21 | str = fgets(fid); |
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| 22 | [info.costfun,info.cost] = strread(str,'%s%f','delimiter',' '); |
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| 23 | |
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| 24 | case '.CLASS MEMBERSHIP' % here come labels |
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| 25 | str = fgets(fid); |
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| 26 | lab = strread(str,'%s','delimiter',' '); |
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| 27 | |
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| 28 | case '.DISTANCE MATRIX' |
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| 29 | D = fscanf(fid,'%f'); |
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| 30 | N = sqrt(length(D)); |
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| 31 | D = reshape(D,N,N); |
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| 32 | if issym(D,1e-10), |
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| 33 | D = 0.5*(D+D'); |
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| 34 | end |
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| 35 | if ~isempty(lab), |
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| 36 | D = dataset(D,lab,'featlab',lab); |
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| 37 | C = classsizes(D); |
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| 38 | % Should it be class frequencies or equal priors? |
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| 39 | if length(C) > 1, |
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| 40 | D = setprior(D,C/sum(C)); |
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| 41 | end |
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| 42 | if ~isempty(info), |
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| 43 | D = setuser(D,info); |
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| 44 | end |
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| 45 | p = findstr(lower(fname),'_norm'); |
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| 46 | if ~isempty(p), |
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| 47 | pos = findstr(lower(fname),'/'); % Linux |
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| 48 | if isempty(pos) |
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| 49 | pos = findstr(lower(fname),'\'); % Windows |
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| 50 | end |
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| 51 | if isempty(pos), |
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| 52 | z = 1; |
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| 53 | else |
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| 54 | I = find(pos < p(1)); |
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| 55 | z = pos(I(end))+1; |
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| 56 | end |
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| 57 | D = setname(D,['Distance matrix for ' fname(z:p(1)-1)]); |
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| 58 | else |
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| 59 | D = setname(D,'Distance matrix'); |
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| 60 | end |
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| 61 | end |
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| 62 | ok = 1; |
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| 63 | otherwise |
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| 64 | ; |
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| 65 | end |
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| 66 | ok = feof(fid); |
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| 67 | end |
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| 68 | fclose(fid); |
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| 69 | return |
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