%NEF Compute Negative Eigen Fraction from dataset or mapping % % F = NEF(D) % F = NEF(W) % % INPUT % D - Dissimilarity matrix % W - Pseudo-Euclidean mapping % % OUTPUT % F - Negative eigenfraction % % DESCRIPTION % The Negative eigenfraction is a ratio expressing the sum of % magnitudes of all negative eigenvalues divided by the sum of % magnitudes of all eigenvalues. The necessary numbers are % stored in W = PE_EM(D). W is computed from D is needed. % % SEE ALSO % DATASETS, MAPPINGS, PE_EM, CHECKEUCL function f = nef(input) if isdataset(input) w = pe_em(input); elseif ~ismapping(input) error('Input should be dataset or mapping') else w = input; end eval = abs(getdata(w,'eval')); sig = getdata(w,'sig'); f = 1-sum(eval(1:sig(1)))/sum(eval);